../dock_file/cl111@rice.edu/bd-screen/20250318220046/blinddock/8v5rpolgAonlynoDNA_format.pdb
protein format start

-----------------------------------------------------------
                    CurvatureSurface_draw
Drawing Solvent Accessible Surface Grid with Curvature data
                    Version 1.3  2021
-----------------------------------------------------------

Warning : Lack of ARG 70 CG
Warning : Lack of ARG 70 CD
Warning : Lack of ARG 70 NE
Warning : Lack of ARG 70 CZ
Warning : Lack of ARG 70 NH1
Warning : Lack of ARG 70 NH2
Warning : Lack of GLN 90 CG
Warning : Lack of GLN 90 CD
Warning : Lack of GLN 90 OE1
Warning : Lack of GLN 90 NE2
Warning : Lack of GLU 93 CG
Warning : Lack of GLU 93 CD
Warning : Lack of GLU 93 OE1
Warning : Lack of GLU 93 OE2
Warning : Lack of MET 94 CG
Warning : Lack of MET 94 SD
Warning : Lack of MET 94 CE
Warning : Lack of GLU 97 CG
Warning : Lack of GLU 97 CD
Warning : Lack of GLU 97 OE1
Warning : Lack of GLU 97 OE2
Warning : Lack of ARG 101 CG
Warning : Lack of ARG 101 CD
Warning : Lack of ARG 101 NE
Warning : Lack of ARG 101 CZ
Warning : Lack of ARG 101 NH1
Warning : Lack of ARG 101 NH2
Warning : Lack of ARG 102 CG
Warning : Lack of ARG 102 CD
Warning : Lack of ARG 102 NE
Warning : Lack of ARG 102 CZ
Warning : Lack of ARG 102 NH1
Warning : Lack of ARG 102 NH2
Warning : Lack of GLU 105 CG
Warning : Lack of GLU 105 CD
Warning : Lack of GLU 105 OE1
Warning : Lack of GLU 105 OE2
Warning : Lack of LYS 109 CG
Warning : Lack of LYS 109 CD
Warning : Lack of LYS 109 CE
Warning : Lack of LYS 109 NZ
Warning : Lack of GLN 115 CG
Warning : Lack of GLN 115 CD
Warning : Lack of GLN 115 OE1
Warning : Lack of GLN 115 NE2
Warning : Lack of LYS 990 CG
Warning : Lack of LYS 990 CD
Warning : Lack of LYS 990 CE
Warning : Lack of LYS 990 NZ
Warning : Lack of ARG 1234 CG
Warning : Lack of ARG 1234 CD
Warning : Lack of ARG 1234 NE
Warning : Lack of ARG 1234 CZ
Warning : Lack of ARG 1234 NH1
Warning : Lack of ARG 1234 NH2
Step ***********
Output Grid Surface File:  ../dock_file/cl111@rice.edu/bd-screen/20250318220046/blinddock/grid.pdb

cluster start!
./../program/clusters ../dock_file/cl111@rice.edu/bd-screen/20250318220046/blinddock/receptor.pdb ../dock_file/cl111@rice.edu/bd-screen/20250318220046/blinddock/grid.pdb 18 ../dock_file/cl111@rice.edu/bd-screen/20250318220046/blinddock/ >../dock_file/cl111@rice.edu/bd-screen/20250318220046/blinddock/conf.txtcluster end!